Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RCL1Q9Y2P8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 AC008556.1-201ENST00000610908 2040 ntBASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 FLJ13224-201ENST00000313737 1514 ntBASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RCL1Q9Y2P8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.08■□□□□ 0.01
RCL1Q9Y2P8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RCL1Q9Y2P8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RCL1Q9Y2P8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RCL1Q9Y2P8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.08■□□□□ 0.01
RCL1Q9Y2P8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.08■□□□□ 0.01
RCL1Q9Y2P8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RCL1Q9Y2P8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
RCL1Q9Y2P8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.08■□□□□ 0
RCL1Q9Y2P8 AL160286.2-201ENST00000567150 934 ntBASIC15.08■□□□□ 0
RCL1Q9Y2P8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RCL1Q9Y2P8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
RCL1Q9Y2P8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 FER1L4-210ENST00000615531 5998 ntBASIC15.07■□□□□ 0
RCL1Q9Y2P8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms