Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 DOC2GP-204ENST00000639052 2548 ntBASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 RBM17P2-201ENST00000616397 1405 ntBASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRCH1Q9Y2L9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 SLC7A5P2-201ENST00000553010 536 ntBASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 RAP2CP1-201ENST00000605103 478 ntBASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 AC231657.2-201ENST00000624556 255 ntBASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 AC018553.1-201ENST00000616682 1458 ntBASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 FLJ38576-201ENST00000623820 2459 ntBASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRCH1Q9Y2L9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.53■□□□□ 0.4
LRCH1Q9Y2L9 AC103702.1-201ENST00000548801 2630 ntBASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRCH1Q9Y2L9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms