Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMC3Q9UQE7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 REXO1L9P-201ENST00000604264 2108 ntBASIC21.67■■□□□ 1.06
SMC3Q9UQE7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 AL135905.2-201ENST00000584934 1404 ntBASIC21.67■■□□□ 1.06
SMC3Q9UQE7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 MCCD1P1-208ENST00000445732 328 ntBASIC21.67■■□□□ 1.06
SMC3Q9UQE7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 SLC25A1P4-201ENST00000567977 778 ntBASIC21.67■■□□□ 1.06
SMC3Q9UQE7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMC3Q9UQE7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 MFAP1P1-201ENST00000442257 1255 ntBASIC21.66■■□□□ 1.06
SMC3Q9UQE7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 AC138028.4-201ENST00000564984 1845 ntBASIC21.66■■□□□ 1.06
SMC3Q9UQE7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMC3Q9UQE7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 AP000593.1-201ENST00000393668 712 ntBASIC21.65■■□□□ 1.06
SMC3Q9UQE7 KRT18P29-201ENST00000397031 1267 ntBASIC21.65■■□□□ 1.06
SMC3Q9UQE7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 ITM2C-210ENST00000620962 501 ntBASIC21.65■■□□□ 1.06
SMC3Q9UQE7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMC3Q9UQE7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMC3Q9UQE7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SMC3Q9UQE7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
SMC3Q9UQE7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.64■■□□□ 1.06
SMC3Q9UQE7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMC3Q9UQE7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMC3Q9UQE7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMC3Q9UQE7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMC3Q9UQE7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SMC3Q9UQE7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 DGCR10-201ENST00000609839 495 ntBASIC21.64■■□□□ 1.05
SMC3Q9UQE7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.64■■□□□ 1.05
SMC3Q9UQE7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms