Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HDAC6Q9UBN7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 AC005332.8-201ENST00000622750 2735 ntBASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 MIR3917-201ENST00000580971 93 ntBASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 AL161938.1-201ENST00000569833 2180 ntBASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HDAC6Q9UBN7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 AL391807.1-203ENST00000604392 2365 ntBASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 AL136038.4-201ENST00000603606 1261 ntBASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 RCC2P3-201ENST00000418112 1537 ntBASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HDAC6Q9UBN7 AC009113.1-201ENST00000570267 2443 ntBASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 AC008556.1-201ENST00000610908 2040 ntBASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 AL512353.2-201ENST00000448759 1962 ntBASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 AL109659.2-201ENST00000606809 1674 ntBASIC20.8■□□□□ 0.92
HDAC6Q9UBN7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
HDAC6Q9UBN7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms