Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 AC124016.1-201ENST00000609552 612 ntBASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 AC006557.6-201ENST00000623071 864 ntBASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 AC097493.4-201ENST00000641197 219 ntBASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 AC068587.9-201ENST00000641814 219 ntBASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 PCDHA12-202ENST00000613593 2588 ntBASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCM2LQ9NUG4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 MTDHP1-201ENST00000605323 784 ntBASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 AL135905.2-201ENST00000584934 1404 ntBASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCM2LQ9NUG4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 ARMC10P1-201ENST00000313754 855 ntBASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 AC239809.2-201ENST00000415381 517 ntBASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 TMPOP1-202ENST00000424642 1267 ntBASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 AC112777.1-201ENST00000540175 1423 ntBASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCM2LQ9NUG4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCM2LQ9NUG4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms