Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
ECHDC1Q9NTX5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 KRT18P38-201ENST00000449496 1282 ntBASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
ECHDC1Q9NTX5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.45■■□□□ 1.19
ECHDC1Q9NTX5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
ECHDC1Q9NTX5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
ECHDC1Q9NTX5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.45■■□□□ 1.19
ECHDC1Q9NTX5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 PVRIG2P-201ENST00000435460 978 ntBASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ECHDC1Q9NTX5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 ESPNP-201ENST00000270691 2015 ntBASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 FAM8A6P-201ENST00000407496 1135 ntBASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 AC022616.7-201ENST00000525383 220 ntBASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 AC079602.3-201ENST00000623931 403 ntBASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
ECHDC1Q9NTX5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 AL359075.1-203ENST00000462729 1002 ntBASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.43■■□□□ 1.18
ECHDC1Q9NTX5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 GMCL1P1-201ENST00000463439 1581 ntBASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.42■■□□□ 1.18
ECHDC1Q9NTX5 AC092647.4-201ENST00000457211 535 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms