Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.67■□□□□ 0.74
CISHQ9NSE2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CISHQ9NSE2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.67■□□□□ 0.74
CISHQ9NSE2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.67■□□□□ 0.74
CISHQ9NSE2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.67■□□□□ 0.74
CISHQ9NSE2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 RASA4DP-201ENST00000460726 1199 ntBASIC19.66■□□□□ 0.74
CISHQ9NSE2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
CISHQ9NSE2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CISHQ9NSE2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 SPDYE15P-201ENST00000424157 909 ntBASIC19.65■□□□□ 0.74
CISHQ9NSE2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 DUX4L26-201ENST00000489078 1255 ntBASIC19.65■□□□□ 0.74
CISHQ9NSE2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.65■□□□□ 0.74
CISHQ9NSE2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CISHQ9NSE2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CISHQ9NSE2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CISHQ9NSE2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CISHQ9NSE2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CISHQ9NSE2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
CISHQ9NSE2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.64■□□□□ 0.73
CISHQ9NSE2 STARP1-201ENST00000397973 869 ntBASIC19.64■□□□□ 0.73
CISHQ9NSE2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CISHQ9NSE2 AC063952.2-201ENST00000498792 1227 ntBASIC19.64■□□□□ 0.73
CISHQ9NSE2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.64■□□□□ 0.73
CISHQ9NSE2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CISHQ9NSE2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CISHQ9NSE2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CISHQ9NSE2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CISHQ9NSE2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.64■□□□□ 0.73
CISHQ9NSE2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.64■□□□□ 0.73
CISHQ9NSE2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.63■□□□□ 0.73
CISHQ9NSE2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 KRT18P38-201ENST00000449496 1282 ntBASIC19.63■□□□□ 0.73
CISHQ9NSE2 HOMER2P1-201ENST00000455653 964 ntBASIC19.63■□□□□ 0.73
CISHQ9NSE2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CISHQ9NSE2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CISHQ9NSE2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms