Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 AC005082.1-201ENST00000413042 2259 ntBASIC21.72■■□□□ 1.07
DDX4Q9NQI0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 MRPL3P1-201ENST00000400109 1033 ntBASIC21.72■■□□□ 1.07
DDX4Q9NQI0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 LINC01711-201ENST00000598340 967 ntBASIC21.72■■□□□ 1.07
DDX4Q9NQI0 AL121912.1-201ENST00000603683 238 ntBASIC21.72■■□□□ 1.07
DDX4Q9NQI0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX4Q9NQI0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 VENTXP7-201ENST00000475503 772 ntBASIC21.71■■□□□ 1.07
DDX4Q9NQI0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.71■■□□□ 1.07
DDX4Q9NQI0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX4Q9NQI0 AC112777.1-201ENST00000540175 1423 ntBASIC21.71■■□□□ 1.07
DDX4Q9NQI0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 AF238378.1-201ENST00000526806 358 ntBASIC21.7■■□□□ 1.06
DDX4Q9NQI0 AC005336.2-201ENST00000593183 939 ntBASIC21.7■■□□□ 1.06
DDX4Q9NQI0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 REXO1L6P-202ENST00000619970 1078 ntBASIC21.7■■□□□ 1.06
DDX4Q9NQI0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX4Q9NQI0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 LINC01126-201ENST00000623515 1646 ntBASIC21.69■■□□□ 1.06
DDX4Q9NQI0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 MINOS1P3-201ENST00000457048 203 ntBASIC21.69■■□□□ 1.06
DDX4Q9NQI0 AC106795.1-205ENST00000512851 1056 ntBASIC21.69■■□□□ 1.06
DDX4Q9NQI0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
DDX4Q9NQI0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 TSPY12P-201ENST00000421279 868 ntBASIC21.68■■□□□ 1.06
DDX4Q9NQI0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX4Q9NQI0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms