Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 AC068587.9-201ENST00000641814 219 ntBASIC19.07■□□□□ 0.64
HPS4Q9NQG7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HPS4Q9NQG7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 FAAHP1-202ENST00000446499 1238 ntBASIC19.06■□□□□ 0.64
HPS4Q9NQG7 MIR3180-4-201ENST00000582223 153 ntBASIC19.06■□□□□ 0.64
HPS4Q9NQG7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 AC098818.2-201ENST00000564925 2320 ntBASIC19.06■□□□□ 0.64
HPS4Q9NQG7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HPS4Q9NQG7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 KRT17P6-201ENST00000453795 1220 ntBASIC19.05■□□□□ 0.64
HPS4Q9NQG7 EMBP1-201ENST00000458200 901 ntBASIC19.05■□□□□ 0.64
HPS4Q9NQG7 AC012615.1-201ENST00000565797 1299 ntBASIC19.05■□□□□ 0.64
HPS4Q9NQG7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HPS4Q9NQG7 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.05■□□□□ 0.64
HPS4Q9NQG7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 KRT8P10-201ENST00000450021 1447 ntBASIC19.04■□□□□ 0.64
HPS4Q9NQG7 FOSL1P1-201ENST00000511041 816 ntBASIC19.04■□□□□ 0.64
HPS4Q9NQG7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HPS4Q9NQG7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HPS4Q9NQG7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms