Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 NIFKP9-201ENST00000419265 221 ntBASIC16.69■□□□□ 0.26
HINT3Q9NQE9 AL596275.1-201ENST00000423464 877 ntBASIC16.69■□□□□ 0.26
HINT3Q9NQE9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HINT3Q9NQE9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 MYLKP1-201ENST00000509077 1580 ntBASIC16.68■□□□□ 0.26
HINT3Q9NQE9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 GNAS-203ENST00000306120 1878 ntBASIC16.68■□□□□ 0.26
HINT3Q9NQE9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 SNORA78-201ENST00000459373 127 ntBASIC16.68■□□□□ 0.26
HINT3Q9NQE9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 MIR4497-201ENST00000583208 89 ntBASIC16.68■□□□□ 0.26
HINT3Q9NQE9 REXO1L9P-201ENST00000604264 2108 ntBASIC16.68■□□□□ 0.26
HINT3Q9NQE9 AC073195.1-201ENST00000607241 877 ntBASIC16.68■□□□□ 0.26
HINT3Q9NQE9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.68■□□□□ 0.26
HINT3Q9NQE9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 LINC00896-202ENST00000609602 2128 ntBASIC16.67■□□□□ 0.26
HINT3Q9NQE9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.67■□□□□ 0.26
HINT3Q9NQE9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 AL353708.3-201ENST00000610272 989 ntBASIC16.67■□□□□ 0.26
HINT3Q9NQE9 AC113410.3-201ENST00000623366 203 ntBASIC16.67■□□□□ 0.26
HINT3Q9NQE9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HINT3Q9NQE9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HINT3Q9NQE9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms