Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 AL049812.1-201ENST00000432563 2267 ntBASIC20.61■□□□□ 0.89
VTA1Q9NP79 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTA1Q9NP79 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTA1Q9NP79 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTA1Q9NP79 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.6■□□□□ 0.89
VTA1Q9NP79 MYLKP1-201ENST00000509077 1580 ntBASIC20.6■□□□□ 0.89
VTA1Q9NP79 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VTA1Q9NP79 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTA1Q9NP79 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTA1Q9NP79 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTA1Q9NP79 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 AL022342.1-201ENST00000400363 863 ntBASIC20.6■□□□□ 0.89
VTA1Q9NP79 TSPY12P-201ENST00000421279 868 ntBASIC20.6■□□□□ 0.89
VTA1Q9NP79 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 AF238378.1-201ENST00000526806 358 ntBASIC20.6■□□□□ 0.89
VTA1Q9NP79 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VTA1Q9NP79 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VTA1Q9NP79 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 AC114341.1-201ENST00000618070 349 ntBASIC20.59■□□□□ 0.89
VTA1Q9NP79 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 SDHAP2-201ENST00000455183 2001 ntBASIC20.59■□□□□ 0.89
VTA1Q9NP79 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VTA1Q9NP79 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.59■□□□□ 0.89
VTA1Q9NP79 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VTA1Q9NP79 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
VTA1Q9NP79 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VTA1Q9NP79 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VTA1Q9NP79 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VTA1Q9NP79 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VTA1Q9NP79 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 AC096582.2-201ENST00000510860 516 ntBASIC20.58■□□□□ 0.89
VTA1Q9NP79 MIR5100-201ENST00000579544 119 ntBASIC20.58■□□□□ 0.89
VTA1Q9NP79 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.58■□□□□ 0.89
VTA1Q9NP79 AL591684.3-201ENST00000605187 298 ntBASIC20.58■□□□□ 0.89
VTA1Q9NP79 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VTA1Q9NP79 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VTA1Q9NP79 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
VTA1Q9NP79 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
VTA1Q9NP79 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VTA1Q9NP79 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 AC064862.7-201ENST00000604520 867 ntBASIC20.57■□□□□ 0.88
VTA1Q9NP79 AL024508.2-201ENST00000607749 1894 ntBASIC20.57■□□□□ 0.88
VTA1Q9NP79 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms