Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 NEK4P2-201ENST00000580004 1012 ntBASIC16.14■□□□□ 0.17
CDH20Q9HBT6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 AC112497.1-201ENST00000624824 639 ntBASIC16.14■□□□□ 0.17
CDH20Q9HBT6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 ANO7L1-203ENST00000602586 1720 ntBASIC16.14■□□□□ 0.17
CDH20Q9HBT6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH20Q9HBT6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 AC004408.2-201ENST00000623613 2777 ntBASIC16.13■□□□□ 0.17
CDH20Q9HBT6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.13■□□□□ 0.17
CDH20Q9HBT6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 BX664615.1-201ENST00000443558 458 ntBASIC16.13■□□□□ 0.17
CDH20Q9HBT6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 AC092865.7-201ENST00000641832 219 ntBASIC16.13■□□□□ 0.17
CDH20Q9HBT6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH20Q9HBT6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 KRT8P7-201ENST00000533003 1432 ntBASIC16.12■□□□□ 0.17
CDH20Q9HBT6 AC112777.1-201ENST00000540175 1423 ntBASIC16.12■□□□□ 0.17
CDH20Q9HBT6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 COX11P1-201ENST00000489116 835 ntBASIC16.12■□□□□ 0.17
CDH20Q9HBT6 KRT18P21-201ENST00000515767 1272 ntBASIC16.12■□□□□ 0.17
CDH20Q9HBT6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 AL138966.2-201ENST00000621997 464 ntBASIC16.12■□□□□ 0.17
CDH20Q9HBT6 AL031432.5-201ENST00000641059 760 ntBASIC16.12■□□□□ 0.17
CDH20Q9HBT6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH20Q9HBT6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 AC005082.1-201ENST00000413042 2259 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms