Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.47■□□□□ 0.55
ZFYVE1Q9HBF4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ZFYVE1Q9HBF4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZFYVE1Q9HBF4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 AL020996.1-203ENST00000536896 2307 ntBASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 AC092647.4-201ENST00000457211 535 ntBASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 AC063952.2-201ENST00000498792 1227 ntBASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 AL157888.1-201ENST00000631930 593 ntBASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
ZFYVE1Q9HBF4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ZFYVE1Q9HBF4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ZFYVE1Q9HBF4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 MIR149-201ENST00000384879 89 ntBASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 STARP1-201ENST00000397973 869 ntBASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 RASA4DP-201ENST00000460726 1199 ntBASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 AL049597.2-201ENST00000565575 961 ntBASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 LINC01238-205ENST00000567549 1107 ntBASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 AC009102.3-201ENST00000623118 1491 ntBASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 AC099343.3-201ENST00000605834 2503 ntBASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZFYVE1Q9HBF4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 AC022616.7-201ENST00000525383 220 ntBASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZFYVE1Q9HBF4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZFYVE1Q9HBF4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZFYVE1Q9HBF4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZFYVE1Q9HBF4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZFYVE1Q9HBF4 FAM8A6P-201ENST00000407496 1135 ntBASIC18.43■□□□□ 0.54
ZFYVE1Q9HBF4 SPDYE15P-201ENST00000424157 909 ntBASIC18.43■□□□□ 0.54
ZFYVE1Q9HBF4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.43■□□□□ 0.54
ZFYVE1Q9HBF4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.43■□□□□ 0.54
ZFYVE1Q9HBF4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms