Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 ANKRD19P-201ENST00000338192 862 ntBASIC20.49■□□□□ 0.87
RNF39Q9H2S5 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 AL513123.1-201ENST00000415883 597 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 OR13Z1P-201ENST00000416141 834 ntBASIC20.49■□□□□ 0.87
RNF39Q9H2S5 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 HAUS1P3-201ENST00000523909 662 ntBASIC20.49■□□□□ 0.87
RNF39Q9H2S5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 AC026741.1-201ENST00000605892 482 ntBASIC20.49■□□□□ 0.87
RNF39Q9H2S5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 KRT8P3-201ENST00000519669 1449 ntBASIC20.49■□□□□ 0.87
RNF39Q9H2S5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF39Q9H2S5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 AC036111.1-201ENST00000533973 1582 ntBASIC20.48■□□□□ 0.87
RNF39Q9H2S5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 MKRN1-211ENST00000480552 906 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 FAM86EP-206ENST00000510506 987 ntBASIC20.48■□□□□ 0.87
RNF39Q9H2S5 AC109635.3-201ENST00000529536 185 ntBASIC20.48■□□□□ 0.87
RNF39Q9H2S5 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 AC087683.2-201ENST00000611384 326 ntBASIC20.48■□□□□ 0.87
RNF39Q9H2S5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF39Q9H2S5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.47■□□□□ 0.87
RNF39Q9H2S5 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 AP003168.1-201ENST00000530091 307 ntBASIC20.47■□□□□ 0.87
RNF39Q9H2S5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 AL392023.2-201ENST00000554687 785 ntTSL 4 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 AC007952.6-201ENST00000573168 2673 ntBASIC20.47■□□□□ 0.87
RNF39Q9H2S5 AC003957.1-201ENST00000625108 2673 ntBASIC20.47■□□□□ 0.87
RNF39Q9H2S5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF39Q9H2S5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AF228730.1-201ENST00000397972 663 ntBASIC20.46■□□□□ 0.87
RNF39Q9H2S5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AL671277.2-201ENST00000458060 996 ntBASIC20.46■□□□□ 0.87
RNF39Q9H2S5 AC097493.2-201ENST00000468675 780 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms