Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 AL390961.4-201ENST00000623958 2535 ntBASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YIPF4Q9BSR8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 AP005242.2-201ENST00000580065 1175 ntBASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 MIR4674-201ENST00000582457 87 ntBASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
YIPF4Q9BSR8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 BICD1-207ENST00000551848 1962 ntBASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 AC112777.1-201ENST00000540175 1423 ntBASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF4Q9BSR8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 MMP23A-201ENST00000234610 1017 ntBASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 CA15P1-201ENST00000481698 905 ntBASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 KRT8P45-201ENST00000414328 1447 ntBASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.36■□□□□ 0.37
YIPF4Q9BSR8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF4Q9BSR8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.35■□□□□ 0.37
YIPF4Q9BSR8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF4Q9BSR8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF4Q9BSR8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF4Q9BSR8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF4Q9BSR8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF4Q9BSR8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
YIPF4Q9BSR8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms