Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXC2Q99958 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXC2Q99958 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXC2Q99958 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXC2Q99958 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXC2Q99958 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 SDHAP1-207ENST00000440850 2000 ntBASIC15.51■□□□□ 0.07
FOXC2Q99958 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
FOXC2Q99958 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
FOXC2Q99958 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXC2Q99958 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 AL691432.2-201ENST00000607222 2038 ntBASIC15.5■□□□□ 0.07
FOXC2Q99958 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXC2Q99958 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXC2Q99958 YBX2P1-201ENST00000394192 760 ntBASIC15.5■□□□□ 0.07
FOXC2Q99958 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXC2Q99958 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXC2Q99958 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
FOXC2Q99958 AC112482.1-201ENST00000492080 688 ntBASIC15.5■□□□□ 0.07
FOXC2Q99958 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXC2Q99958 AC040169.1-201ENST00000565382 521 ntBASIC15.5■□□□□ 0.07
FOXC2Q99958 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXC2Q99958 MIR3197-201ENST00000582241 73 ntBASIC15.5■□□□□ 0.07
FOXC2Q99958 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXC2Q99958 MTDHP3-201ENST00000594186 672 ntBASIC15.5■□□□□ 0.07
FOXC2Q99958 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXC2Q99958 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXC2Q99958 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXC2Q99958 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXC2Q99958 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXC2Q99958 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXC2Q99958 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXC2Q99958 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXC2Q99958 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXC2Q99958 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXC2Q99958 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXC2Q99958 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXC2Q99958 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXC2Q99958 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FOXC2Q99958 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXC2Q99958 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
FOXC2Q99958 KRT18P3-201ENST00000451602 1288 ntBASIC15.49■□□□□ 0.07
FOXC2Q99958 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
FOXC2Q99958 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXC2Q99958 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXC2Q99958 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 AC034236.2-201ENST00000606662 1610 ntBASIC15.49■□□□□ 0.07
FOXC2Q99958 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXC2Q99958 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 AL512353.2-201ENST00000448759 1962 ntBASIC15.49■□□□□ 0.07
FOXC2Q99958 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXC2Q99958 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
FOXC2Q99958 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXC2Q99958 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXC2Q99958 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXC2Q99958 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXC2Q99958 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FOXC2Q99958 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXC2Q99958 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
FOXC2Q99958 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXC2Q99958 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FOXC2Q99958 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXC2Q99958 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXC2Q99958 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXC2Q99958 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.48■□□□□ 0.07
FOXC2Q99958 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FOXC2Q99958 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXC2Q99958 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXC2Q99958 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.48■□□□□ 0.07
FOXC2Q99958 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms