Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ARID3AQ99856 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARID3AQ99856 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARID3AQ99856 AC098590.1-201ENST00000468126 897 ntBASIC20.94■□□□□ 0.94
ARID3AQ99856 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.94■□□□□ 0.94
ARID3AQ99856 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ARID3AQ99856 C1QBPP2-201ENST00000528754 825 ntBASIC20.94■□□□□ 0.94
ARID3AQ99856 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ARID3AQ99856 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.94■□□□□ 0.94
ARID3AQ99856 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.94■□□□□ 0.94
ARID3AQ99856 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARID3AQ99856 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ARID3AQ99856 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ARID3AQ99856 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ARID3AQ99856 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.94■□□□□ 0.94
ARID3AQ99856 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ARID3AQ99856 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ARID3AQ99856 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.94■□□□□ 0.94
ARID3AQ99856 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ARID3AQ99856 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.94■□□□□ 0.94
ARID3AQ99856 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ARID3AQ99856 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ARID3AQ99856 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.94■□□□□ 0.94
ARID3AQ99856 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.94■□□□□ 0.94
ARID3AQ99856 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
ARID3AQ99856 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ARID3AQ99856 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ARID3AQ99856 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ARID3AQ99856 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.93■□□□□ 0.94
ARID3AQ99856 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ARID3AQ99856 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ARID3AQ99856 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.93■□□□□ 0.94
ARID3AQ99856 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.93■□□□□ 0.94
ARID3AQ99856 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.93■□□□□ 0.94
ARID3AQ99856 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
ARID3AQ99856 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.93■□□□□ 0.94
ARID3AQ99856 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.93■□□□□ 0.94
ARID3AQ99856 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.93■□□□□ 0.94
ARID3AQ99856 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.93■□□□□ 0.94
ARID3AQ99856 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ARID3AQ99856 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ARID3AQ99856 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.92■□□□□ 0.94
ARID3AQ99856 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
ARID3AQ99856 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 BICD1-207ENST00000551848 1962 ntBASIC20.92■□□□□ 0.94
ARID3AQ99856 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
ARID3AQ99856 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.92■□□□□ 0.94
ARID3AQ99856 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.92■□□□□ 0.94
ARID3AQ99856 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ARID3AQ99856 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.92■□□□□ 0.94
ARID3AQ99856 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.92■□□□□ 0.94
ARID3AQ99856 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ARID3AQ99856 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ARID3AQ99856 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARID3AQ99856 AL391005.1-201ENST00000623953 2435 ntBASIC20.92■□□□□ 0.94
ARID3AQ99856 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.92■□□□□ 0.94
ARID3AQ99856 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARID3AQ99856 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARID3AQ99856 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARID3AQ99856 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARID3AQ99856 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ARID3AQ99856 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARID3AQ99856 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARID3AQ99856 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.91■□□□□ 0.94
ARID3AQ99856 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms