Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCC1Q96S66 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.53■□□□□ 0.08
CLCC1Q96S66 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCC1Q96S66 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCC1Q96S66 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCC1Q96S66 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCC1Q96S66 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCC1Q96S66 AC141586.5-201ENST00000624546 2050 ntBASIC15.53■□□□□ 0.08
CLCC1Q96S66 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCC1Q96S66 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCC1Q96S66 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLCC1Q96S66 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCC1Q96S66 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 NBPF21P-201ENST00000425093 1451 ntBASIC15.52■□□□□ 0.08
CLCC1Q96S66 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 AC006333.2-201ENST00000607957 2099 ntBASIC15.52■□□□□ 0.08
CLCC1Q96S66 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCC1Q96S66 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCC1Q96S66 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCC1Q96S66 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCC1Q96S66 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.52■□□□□ 0.07
CLCC1Q96S66 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CLCC1Q96S66 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.52■□□□□ 0.07
CLCC1Q96S66 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCC1Q96S66 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 KRT8P8-201ENST00000434750 1448 ntBASIC15.51■□□□□ 0.07
CLCC1Q96S66 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 KRASP1-201ENST00000407852 552 ntBASIC15.51■□□□□ 0.07
CLCC1Q96S66 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 PCDHA12-202ENST00000613593 2588 ntBASIC15.51■□□□□ 0.07
CLCC1Q96S66 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 AC068587.6-202ENST00000641839 5619 ntBASIC15.51■□□□□ 0.07
CLCC1Q96S66 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCC1Q96S66 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCC1Q96S66 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCC1Q96S66 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms