Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BBS4Q96RK4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.5■□□□□ 0.39
BBS4Q96RK4 MYLKP1-201ENST00000509077 1580 ntBASIC17.5■□□□□ 0.39
BBS4Q96RK4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BBS4Q96RK4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
BBS4Q96RK4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.5■□□□□ 0.39
BBS4Q96RK4 AP000593.1-201ENST00000393668 712 ntBASIC17.5■□□□□ 0.39
BBS4Q96RK4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 KRT18P41-201ENST00000518924 1277 ntBASIC17.5■□□□□ 0.39
BBS4Q96RK4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.5■□□□□ 0.39
BBS4Q96RK4 MIR4674-201ENST00000582457 87 ntBASIC17.5■□□□□ 0.39
BBS4Q96RK4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.5■□□□□ 0.39
BBS4Q96RK4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BBS4Q96RK4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
BBS4Q96RK4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BBS4Q96RK4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 TSPY15P-201ENST00000457163 923 ntBASIC17.49■□□□□ 0.39
BBS4Q96RK4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BBS4Q96RK4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BBS4Q96RK4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 AC092338.2-201ENST00000568827 1415 ntBASIC17.48■□□□□ 0.39
BBS4Q96RK4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 AC066615.1-201ENST00000640911 628 ntBASIC17.48■□□□□ 0.39
BBS4Q96RK4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BBS4Q96RK4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
BBS4Q96RK4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms