Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 AC103702.1-201ENST00000548801 2630 ntBASIC17.39■□□□□ 0.37
NR1H4Q96RI1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.39■□□□□ 0.37
NR1H4Q96RI1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H4Q96RI1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 OR6D1P-203ENST00000641209 4860 ntBASIC17.38■□□□□ 0.37
NR1H4Q96RI1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 AC123595.1-201ENST00000440769 1046 ntBASIC17.38■□□□□ 0.37
NR1H4Q96RI1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NR1H4Q96RI1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 CYP21A1P-202ENST00000354927 1481 ntBASIC17.37■□□□□ 0.37
NR1H4Q96RI1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 AC006116.8-202ENST00000587620 1550 ntBASIC17.37■□□□□ 0.37
NR1H4Q96RI1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.37■□□□□ 0.37
NR1H4Q96RI1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.37■□□□□ 0.37
NR1H4Q96RI1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 PKD1P5-201ENST00000532415 10291 ntBASIC17.37■□□□□ 0.37
NR1H4Q96RI1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NR1H4Q96RI1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 AC116351.2-201ENST00000606540 1585 ntBASIC17.36■□□□□ 0.37
NR1H4Q96RI1 AC068418.2-201ENST00000577309 3703 ntBASIC17.36■□□□□ 0.37
NR1H4Q96RI1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 AC105020.1-201ENST00000435356 2205 ntBASIC17.36■□□□□ 0.37
NR1H4Q96RI1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.36■□□□□ 0.37
NR1H4Q96RI1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms