Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
COL21A1Q96P44 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COL21A1Q96P44 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.45■□□□□ 0.38
COL21A1Q96P44 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 NAPSB-206ENST00000562112 1266 ntBASIC17.45■□□□□ 0.38
COL21A1Q96P44 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 AC068587.9-201ENST00000641814 219 ntBASIC17.45■□□□□ 0.38
COL21A1Q96P44 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 MTMR9LP-203ENST00000426597 1545 ntBASIC17.45■□□□□ 0.38
COL21A1Q96P44 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 KRT8P9-201ENST00000558927 1449 ntBASIC17.45■□□□□ 0.38
COL21A1Q96P44 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.45■□□□□ 0.38
COL21A1Q96P44 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.45■□□□□ 0.38
COL21A1Q96P44 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.45■□□□□ 0.38
COL21A1Q96P44 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.45■□□□□ 0.38
COL21A1Q96P44 AC073592.3-201ENST00000625118 1834 ntBASIC17.44■□□□□ 0.38
COL21A1Q96P44 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 SLC25A1P2-201ENST00000430693 912 ntBASIC17.44■□□□□ 0.38
COL21A1Q96P44 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.44■□□□□ 0.38
COL21A1Q96P44 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL21A1Q96P44 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 AL499627.1-201ENST00000569373 2188 ntBASIC17.43■□□□□ 0.38
COL21A1Q96P44 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.43■□□□□ 0.38
COL21A1Q96P44 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 AC087499.1-201ENST00000418141 1075 ntBASIC17.43■□□□□ 0.38
COL21A1Q96P44 CCR12P-201ENST00000446203 998 ntBASIC17.43■□□□□ 0.38
COL21A1Q96P44 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 KRT8P3-201ENST00000519669 1449 ntBASIC17.43■□□□□ 0.38
COL21A1Q96P44 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 CYP2D8P-201ENST00000433633 1490 ntBASIC17.43■□□□□ 0.38
COL21A1Q96P44 KRT8P32-201ENST00000512863 1461 ntBASIC17.43■□□□□ 0.38
COL21A1Q96P44 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COL21A1Q96P44 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
COL21A1Q96P44 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL21A1Q96P44 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COL21A1Q96P44 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL21A1Q96P44 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms