Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AC068880.1-201ENST00000507289 2297 ntBASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.34■□□□□ 0.85
RPGRIP1Q96KN7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 VENTXP5-201ENST00000523979 775 ntBASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRIP1Q96KN7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRIP1Q96KN7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 IRX1P1-201ENST00000438849 1838 ntBASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 LTB4R2-202ENST00000528054 3092 ntBASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 AL023803.3-201ENST00000615559 522 ntBASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRIP1Q96KN7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 PRSS44-201ENST00000515154 1146 ntBASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRIP1Q96KN7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPGRIP1Q96KN7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms