Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC104390.1-201ENST00000555663 520 ntBASIC19.93■□□□□ 0.78
LRCH3Q96II8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRCH3Q96II8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRCH3Q96II8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.92■□□□□ 0.78
LRCH3Q96II8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRCH3Q96II8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH3Q96II8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH3Q96II8 AP001271.2-201ENST00000624018 1556 ntBASIC19.91■□□□□ 0.78
LRCH3Q96II8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH3Q96II8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 AC092720.2-201ENST00000602388 1665 ntBASIC19.91■□□□□ 0.78
LRCH3Q96II8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH3Q96II8 AC112907.3-201ENST00000577781 2400 ntBASIC19.91■□□□□ 0.78
LRCH3Q96II8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH3Q96II8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH3Q96II8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 AC024563.2-201ENST00000603282 481 ntBASIC19.91■□□□□ 0.78
LRCH3Q96II8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH3Q96II8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH3Q96II8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRCH3Q96II8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.91■□□□□ 0.78
LRCH3Q96II8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRCH3Q96II8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.9■□□□□ 0.78
LRCH3Q96II8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.89■□□□□ 0.77
LRCH3Q96II8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRCH3Q96II8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms