Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC006058.3-201ENST00000606217 1069 ntBASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 AC124016.1-201ENST00000609552 612 ntBASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 AC110285.5-201ENST00000611501 352 ntBASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 KRT8P32-201ENST00000512863 1461 ntBASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 KRT8P45-201ENST00000414328 1447 ntBASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 REXO1L9P-201ENST00000604264 2108 ntBASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC47A1Q96FL8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 CD99P1-205ENST00000527459 561 ntBASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 AC073648.6-201ENST00000641589 218 ntBASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 AC012313.1-201ENST00000593393 3059 ntBASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 AL357033.4-201ENST00000617703 1807 ntBASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC47A1Q96FL8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.39■□□□□ 0.38
SLC47A1Q96FL8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SLC47A1Q96FL8 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.39■□□□□ 0.38
SLC47A1Q96FL8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.39■□□□□ 0.38
SLC47A1Q96FL8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC47A1Q96FL8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms