Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
ZNF428Q96B54 AC009113.1-201ENST00000570267 2443 ntBASIC23.69■■□□□ 1.38
ZNF428Q96B54 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF428Q96B54 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
ZNF428Q96B54 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.69■■□□□ 1.38
ZNF428Q96B54 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
ZNF428Q96B54 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.69■■□□□ 1.38
ZNF428Q96B54 AC079602.3-201ENST00000623931 403 ntBASIC23.69■■□□□ 1.38
ZNF428Q96B54 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF428Q96B54 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
ZNF428Q96B54 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF428Q96B54 AC120498.9-201ENST00000339021 3867 ntBASIC23.69■■□□□ 1.38
ZNF428Q96B54 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC23.69■■□□□ 1.38
ZNF428Q96B54 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF428Q96B54 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF428Q96B54 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.68■■□□□ 1.38
ZNF428Q96B54 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 AC034232.1-201ENST00000506026 1064 ntBASIC23.68■■□□□ 1.38
ZNF428Q96B54 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF428Q96B54 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.68■■□□□ 1.38
ZNF428Q96B54 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.67■■□□□ 1.38
ZNF428Q96B54 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
ZNF428Q96B54 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.67■■□□□ 1.38
ZNF428Q96B54 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.67■■□□□ 1.38
ZNF428Q96B54 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.67■■□□□ 1.38
ZNF428Q96B54 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.67■■□□□ 1.38
ZNF428Q96B54 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.67■■□□□ 1.38
ZNF428Q96B54 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.67■■□□□ 1.38
ZNF428Q96B54 AL157888.1-201ENST00000631930 593 ntBASIC23.67■■□□□ 1.38
ZNF428Q96B54 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.67■■□□□ 1.38
ZNF428Q96B54 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF428Q96B54 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 HBZP1-201ENST00000354915 429 ntBASIC23.66■■□□□ 1.38
ZNF428Q96B54 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 HCG4P8-203ENST00000443049 980 ntBASIC23.66■■□□□ 1.38
ZNF428Q96B54 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.66■■□□□ 1.38
ZNF428Q96B54 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF428Q96B54 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZNF428Q96B54 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.65■■□□□ 1.38
ZNF428Q96B54 ASL-204ENST00000395331 1538 ntTSL 5 BASIC23.65■■□□□ 1.38
ZNF428Q96B54 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
ZNF428Q96B54 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZNF428Q96B54 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
ZNF428Q96B54 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZNF428Q96B54 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.65■■□□□ 1.38
ZNF428Q96B54 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms