Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRQ92834 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRQ92834 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.69■■□□□ 1.22
RPGRQ92834 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
RPGRQ92834 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRQ92834 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RPGRQ92834 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.68■■□□□ 1.22
RPGRQ92834 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RPGRQ92834 AL032819.2-201ENST00000624543 2162 ntBASIC22.68■■□□□ 1.22
RPGRQ92834 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
RPGRQ92834 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
RPGRQ92834 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.68■■□□□ 1.22
RPGRQ92834 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.68■■□□□ 1.22
RPGRQ92834 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.68■■□□□ 1.22
RPGRQ92834 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC22.68■■□□□ 1.22
RPGRQ92834 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC22.68■■□□□ 1.22
RPGRQ92834 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.68■■□□□ 1.22
RPGRQ92834 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.68■■□□□ 1.22
RPGRQ92834 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RPGRQ92834 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
RPGRQ92834 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.67■■□□□ 1.22
RPGRQ92834 RCN1P2-201ENST00000398357 915 ntBASIC22.67■■□□□ 1.22
RPGRQ92834 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 KRT18P58-201ENST00000527480 1120 ntBASIC22.67■■□□□ 1.22
RPGRQ92834 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.67■■□□□ 1.22
RPGRQ92834 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RPGRQ92834 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC22.67■■□□□ 1.22
RPGRQ92834 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RPGRQ92834 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RPGRQ92834 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.67■■□□□ 1.22
RPGRQ92834 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 AC009102.3-201ENST00000623118 1491 ntBASIC22.66■■□□□ 1.22
RPGRQ92834 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.66■■□□□ 1.22
RPGRQ92834 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 AC243591.1-201ENST00000452967 1364 ntBASIC22.66■■□□□ 1.22
RPGRQ92834 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.66■■□□□ 1.22
RPGRQ92834 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.66■■□□□ 1.22
RPGRQ92834 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.66■■□□□ 1.22
RPGRQ92834 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.66■■□□□ 1.22
RPGRQ92834 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC22.66■■□□□ 1.22
RPGRQ92834 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC22.66■■□□□ 1.22
RPGRQ92834 RNPS1P1-201ENST00000507437 918 ntBASIC22.66■■□□□ 1.22
RPGRQ92834 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.66■■□□□ 1.22
RPGRQ92834 AC005336.2-201ENST00000593183 939 ntBASIC22.66■■□□□ 1.22
RPGRQ92834 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.66■■□□□ 1.22
RPGRQ92834 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RPGRQ92834 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RPGRQ92834 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.66■■□□□ 1.22
RPGRQ92834 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RPGRQ92834 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.66■■□□□ 1.22
RPGRQ92834 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RPGRQ92834 TP73-AS1-210ENST00000637775 1455 ntBASIC22.66■■□□□ 1.22
RPGRQ92834 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 AC018712.1-201ENST00000455767 687 ntBASIC22.65■■□□□ 1.22
RPGRQ92834 AC073648.2-201ENST00000510116 352 ntBASIC22.65■■□□□ 1.22
RPGRQ92834 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.65■■□□□ 1.22
RPGRQ92834 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.65■■□□□ 1.22
RPGRQ92834 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.65■■□□□ 1.22
RPGRQ92834 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.65■■□□□ 1.22
RPGRQ92834 AL355877.3-201ENST00000622820 899 ntBASIC22.65■■□□□ 1.22
RPGRQ92834 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.65■■□□□ 1.22
RPGRQ92834 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RPGRQ92834 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms