Protein–RNA interactions for Protein: Q8WWF1

C1orf54, Uncharacterized protein C1orf54, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf54Q8WWF1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C1orf54Q8WWF1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C1orf54Q8WWF1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 AL023284.2-201ENST00000405850 579 ntBASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 KRT18P41-201ENST00000518924 1277 ntBASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 AL359736.2-201ENST00000621992 437 ntBASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 FAM197Y4-202ENST00000622692 608 ntBASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C1orf54Q8WWF1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 GPAT2P1-201ENST00000444924 1672 ntBASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 FSCN1P1-201ENST00000568912 1481 ntBASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 MIR564-202ENST00000385049 94 ntBASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C1orf54Q8WWF1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C1orf54Q8WWF1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C1orf54Q8WWF1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1orf54Q8WWF1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1orf54Q8WWF1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
C1orf54Q8WWF1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.15■□□□□ 0.66
C1orf54Q8WWF1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1orf54Q8WWF1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C1orf54Q8WWF1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms