Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.69■■□□□ 1.06
STAG1Q8WVM7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.68■■□□□ 1.06
STAG1Q8WVM7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 AC120498.9-201ENST00000339021 3867 ntBASIC21.67■■□□□ 1.06
STAG1Q8WVM7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
STAG1Q8WVM7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 LINC01126-201ENST00000623515 1646 ntBASIC21.66■■□□□ 1.06
STAG1Q8WVM7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.66■■□□□ 1.06
STAG1Q8WVM7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
STAG1Q8WVM7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
STAG1Q8WVM7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
STAG1Q8WVM7 KRT89P-201ENST00000620027 1478 ntBASIC21.65■■□□□ 1.06
STAG1Q8WVM7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
STAG1Q8WVM7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
STAG1Q8WVM7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
STAG1Q8WVM7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
STAG1Q8WVM7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
STAG1Q8WVM7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
STAG1Q8WVM7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms