Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CT55Q8WUE5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.16■□□□□ 0.34
CT55Q8WUE5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CT55Q8WUE5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.16■□□□□ 0.34
CT55Q8WUE5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CT55Q8WUE5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.16■□□□□ 0.34
CT55Q8WUE5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.16■□□□□ 0.34
CT55Q8WUE5 SLC25A6P4-201ENST00000586535 553 ntBASIC17.16■□□□□ 0.34
CT55Q8WUE5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.16■□□□□ 0.34
CT55Q8WUE5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CT55Q8WUE5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CT55Q8WUE5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CT55Q8WUE5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CT55Q8WUE5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CT55Q8WUE5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 AC099343.3-201ENST00000605834 2503 ntBASIC17.15■□□□□ 0.34
CT55Q8WUE5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 SAPCD2P3-201ENST00000455031 850 ntBASIC17.15■□□□□ 0.34
CT55Q8WUE5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.15■□□□□ 0.34
CT55Q8WUE5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CT55Q8WUE5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CT55Q8WUE5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CT55Q8WUE5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CT55Q8WUE5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 MRPL3P1-201ENST00000400109 1033 ntBASIC17.14■□□□□ 0.33
CT55Q8WUE5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 AC079776.4-201ENST00000511039 504 ntBASIC17.14■□□□□ 0.33
CT55Q8WUE5 AC106795.1-205ENST00000512851 1056 ntBASIC17.14■□□□□ 0.33
CT55Q8WUE5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 AC008687.5-201ENST00000593746 558 ntBASIC17.14■□□□□ 0.33
CT55Q8WUE5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.14■□□□□ 0.33
CT55Q8WUE5 REXO1L6P-202ENST00000619970 1078 ntBASIC17.14■□□□□ 0.33
CT55Q8WUE5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.14■□□□□ 0.33
CT55Q8WUE5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.14■□□□□ 0.33
CT55Q8WUE5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CT55Q8WUE5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.13■□□□□ 0.33
CT55Q8WUE5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CT55Q8WUE5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.13■□□□□ 0.33
CT55Q8WUE5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.13■□□□□ 0.33
CT55Q8WUE5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.13■□□□□ 0.33
CT55Q8WUE5 AL662844.1-201ENST00000546340 181 ntBASIC17.13■□□□□ 0.33
CT55Q8WUE5 BNIP3P18-201ENST00000593976 575 ntBASIC17.13■□□□□ 0.33
CT55Q8WUE5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CT55Q8WUE5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CT55Q8WUE5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CT55Q8WUE5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms