Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LMO3Q8TAP4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 NOC2LP2-201ENST00000407594 1944 ntBASIC19.76■□□□□ 0.75
LMO3Q8TAP4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 REXO1L9P-201ENST00000604264 2108 ntBASIC19.76■□□□□ 0.75
LMO3Q8TAP4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LMO3Q8TAP4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 AL133373.2-201ENST00000623187 2828 ntBASIC19.75■□□□□ 0.75
LMO3Q8TAP4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 GCSHP2-201ENST00000560971 527 ntBASIC19.75■□□□□ 0.75
LMO3Q8TAP4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LMO3Q8TAP4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 TERF1P1-201ENST00000311003 1181 ntBASIC19.74■□□□□ 0.75
LMO3Q8TAP4 AC211429.1-201ENST00000415277 523 ntBASIC19.74■□□□□ 0.75
LMO3Q8TAP4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.74■□□□□ 0.75
LMO3Q8TAP4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms