Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 FAM197Y8-203ENST00000450145 560 ntBASIC14.33□□□□□ -0.12
LINC01006Q8NI28 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 AC113404.2-201ENST00000507884 177 ntBASIC14.33□□□□□ -0.12
LINC01006Q8NI28 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 AP001005.1-201ENST00000571755 1248 ntBASIC14.33□□□□□ -0.12
LINC01006Q8NI28 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC01006Q8NI28 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 AC009102.3-201ENST00000623118 1491 ntBASIC14.32□□□□□ -0.12
LINC01006Q8NI28 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 AC096582.2-201ENST00000510860 516 ntBASIC14.32□□□□□ -0.12
LINC01006Q8NI28 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 AC006538.3-201ENST00000612495 578 ntBASIC14.32□□□□□ -0.12
LINC01006Q8NI28 AL773604.1-201ENST00000617417 272 ntBASIC14.32□□□□□ -0.12
LINC01006Q8NI28 AC114341.1-201ENST00000618070 349 ntBASIC14.32□□□□□ -0.12
LINC01006Q8NI28 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01006Q8NI28 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LINC01006Q8NI28 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01006Q8NI28 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms