Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC24.55■■□□□ 1.52
COL22A1Q8NFW1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 MIR1199-201ENST00000621445 119 ntBASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL22A1Q8NFW1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 MKNK2P1-201ENST00000437526 628 ntBASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 AC092364.2-202ENST00000597012 1073 ntBASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 MIR770-201ENST00000390219 98 ntBASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 AP002472.1-201ENST00000577490 586 ntBASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 AC073592.4-201ENST00000623827 446 ntBASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 PGM5P2-202ENST00000637225 1043 ntBASIC24.53■■□□□ 1.52
COL22A1Q8NFW1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 SNHG9-202ENST00000564014 471 ntBASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 FP475955.4-201ENST00000623131 1990 ntBASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.52■■□□□ 1.52
COL22A1Q8NFW1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 HLA-J-203ENST00000494367 1087 ntBASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 AC006557.2-201ENST00000592985 1240 ntBASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 C20orf181-201ENST00000623918 480 ntBASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC24.51■■□□□ 1.51
COL22A1Q8NFW1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 ELL2P1-201ENST00000413990 1906 ntBASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 AP000867.4-201ENST00000641616 219 ntBASIC24.5■■□□□ 1.51
COL22A1Q8NFW1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms