Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 MIR149-201ENST00000384879 89 ntBASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 ECEL1P3-201ENST00000427961 737 ntBASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 MIR3180-4-201ENST00000582223 153 ntBASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 AC009102.3-201ENST00000623118 1491 ntBASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 SLC25A3P1-201ENST00000443844 931 ntBASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM35BQ8NCS4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 AP000523.1-201ENST00000398242 1049 ntBASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM35BQ8NCS4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 AL354751.1-201ENST00000412768 1863 ntBASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM35BQ8NCS4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 AL390961.4-201ENST00000623958 2535 ntBASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 AC010240.3-201ENST00000607688 395 ntBASIC19.51■□□□□ 0.71
TMEM35BQ8NCS4 AC024243.1-201ENST00000609234 778 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms