Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 TSPY20P-201ENST00000450910 630 ntBASIC16.34■□□□□ 0.21
DTX3Q8N9I9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 ITM2C-210ENST00000620962 501 ntBASIC16.34■□□□□ 0.21
DTX3Q8N9I9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
DTX3Q8N9I9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.33■□□□□ 0.21
DTX3Q8N9I9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
DTX3Q8N9I9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
DTX3Q8N9I9 AC124283.5-201ENST00000624661 1809 ntBASIC16.33■□□□□ 0.21
DTX3Q8N9I9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
DTX3Q8N9I9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DTX3Q8N9I9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.33■□□□□ 0.21
DTX3Q8N9I9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.33■□□□□ 0.21
DTX3Q8N9I9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
DTX3Q8N9I9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DTX3Q8N9I9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 AP006294.2-201ENST00000641667 209 ntBASIC16.33■□□□□ 0.2
DTX3Q8N9I9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.33■□□□□ 0.2
DTX3Q8N9I9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 HLA-B-256ENST00000639848 1089 ntBASIC16.32■□□□□ 0.2
DTX3Q8N9I9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DTX3Q8N9I9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX3Q8N9I9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX3Q8N9I9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX3Q8N9I9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
DTX3Q8N9I9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.31■□□□□ 0.2
DTX3Q8N9I9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.31■□□□□ 0.2
DTX3Q8N9I9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.31■□□□□ 0.2
DTX3Q8N9I9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DTX3Q8N9I9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DTX3Q8N9I9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms