Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDH20Q8N6Y1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 KRT18P41-201ENST00000518924 1277 ntBASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 MIR3917-201ENST00000580971 93 ntBASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 AC010240.3-201ENST00000607688 395 ntBASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH20Q8N6Y1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDH20Q8N6Y1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDH20Q8N6Y1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDH20Q8N6Y1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH20Q8N6Y1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.83■□□□□ 0.61
PCDH20Q8N6Y1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH20Q8N6Y1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDH20Q8N6Y1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 MIR3180-4-201ENST00000582223 153 ntBASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 AL121956.5-201ENST00000625261 221 ntBASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 AC005082.1-201ENST00000413042 2259 ntBASIC18.83■□□□□ 0.6
PCDH20Q8N6Y1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 HYMAI.1-201ENST00000620949 238 ntBASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH20Q8N6Y1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms