Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 COPE-211ENST00000600932 1144 ntTSL 5 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA6Q8N139 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC27.23■■□□□ 1.95
ABCA6Q8N139 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ABCA6Q8N139 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC27.22■■□□□ 1.95
ABCA6Q8N139 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC27.22■■□□□ 1.95
ABCA6Q8N139 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC27.22■■□□□ 1.95
ABCA6Q8N139 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC27.22■■□□□ 1.95
ABCA6Q8N139 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27.22■■□□□ 1.95
ABCA6Q8N139 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC27.22■■□□□ 1.95
ABCA6Q8N139 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC27.22■■□□□ 1.95
ABCA6Q8N139 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ABCA6Q8N139 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC27.21■■□□□ 1.95
ABCA6Q8N139 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC27.21■■□□□ 1.95
ABCA6Q8N139 FUOM-202ENST00000368551 628 ntTSL 3 BASIC27.21■■□□□ 1.95
ABCA6Q8N139 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC27.21■■□□□ 1.95
ABCA6Q8N139 AC009154.2-201ENST00000621177 724 ntBASIC27.21■■□□□ 1.95
ABCA6Q8N139 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC27.21■■□□□ 1.95
ABCA6Q8N139 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC27.21■■□□□ 1.95
ABCA6Q8N139 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
ABCA6Q8N139 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC27.2■■□□□ 1.95
ABCA6Q8N139 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
ABCA6Q8N139 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.95
ABCA6Q8N139 KRT18P27-201ENST00000427733 1299 ntBASIC27.2■■□□□ 1.95
ABCA6Q8N139 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC27.2■■□□□ 1.95
ABCA6Q8N139 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC27.2■■□□□ 1.95
ABCA6Q8N139 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC27.2■■□□□ 1.95
ABCA6Q8N139 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
ABCA6Q8N139 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
ABCA6Q8N139 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ABCA6Q8N139 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
ABCA6Q8N139 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
ABCA6Q8N139 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC27.2■■□□□ 1.94
ABCA6Q8N139 LAGE3P1-201ENST00000425356 484 ntBASIC27.19■■□□□ 1.94
ABCA6Q8N139 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC27.19■■□□□ 1.94
ABCA6Q8N139 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC27.19■■□□□ 1.94
ABCA6Q8N139 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC27.19■■□□□ 1.94
ABCA6Q8N139 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ABCA6Q8N139 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC27.19■■□□□ 1.94
ABCA6Q8N139 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
ABCA6Q8N139 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC27.19■■□□□ 1.94
ABCA6Q8N139 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC27.19■■□□□ 1.94
ABCA6Q8N139 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ABCA6Q8N139 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
ABCA6Q8N139 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC27.19■■□□□ 1.94
ABCA6Q8N139 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ABCA6Q8N139 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC27.19■■□□□ 1.94
ABCA6Q8N139 RFPL4AP1-201ENST00000530883 850 ntBASIC27.19■■□□□ 1.94
ABCA6Q8N139 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 AC009102.3-201ENST00000623118 1491 ntBASIC27.18■■□□□ 1.94
ABCA6Q8N139 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ABCA6Q8N139 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ABCA6Q8N139 AC023274.1-201ENST00000418278 595 ntBASIC27.18■■□□□ 1.94
ABCA6Q8N139 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 MTCL1P1-201ENST00000446207 792 ntBASIC27.18■■□□□ 1.94
ABCA6Q8N139 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 CYMP-203ENST00000474680 1263 ntBASIC27.18■■□□□ 1.94
ABCA6Q8N139 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
ABCA6Q8N139 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 AC105339.3-201ENST00000560043 636 ntBASIC27.18■■□□□ 1.94
ABCA6Q8N139 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ABCA6Q8N139 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
ABCA6Q8N139 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
ABCA6Q8N139 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
ABCA6Q8N139 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
ABCA6Q8N139 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms