Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 MTDHP3-201ENST00000594186 672 ntBASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.33■□□□□ 0.36
COL27A1Q8IZC6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 AC010327.4-202ENST00000591484 748 ntBASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 AC011467.2-201ENST00000598425 242 ntBASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL27A1Q8IZC6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 AC098831.1-202ENST00000438821 336 ntBASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 ABCD1P5-201ENST00000445663 754 ntBASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 AC068472.1-201ENST00000474589 881 ntBASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 TERC-201ENST00000602385 541 ntBASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 AL499627.1-201ENST00000569373 2188 ntBASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 AC083906.6-201ENST00000641366 219 ntBASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL27A1Q8IZC6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 AC125634.1-201ENST00000438758 1403 ntBASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 AC132008.2-207ENST00000454517 770 ntBASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 LINC01126-201ENST00000623515 1646 ntBASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL27A1Q8IZC6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms