Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
LYSMD2Q8IV50 AC006116.8-202ENST00000587620 1550 ntBASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LYSMD2Q8IV50 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.21■□□□□ 0.18
LYSMD2Q8IV50 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.21■□□□□ 0.18
LYSMD2Q8IV50 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.21■□□□□ 0.18
LYSMD2Q8IV50 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LYSMD2Q8IV50 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LYSMD2Q8IV50 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.19■□□□□ 0.18
LYSMD2Q8IV50 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms