Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 AL390961.4-201ENST00000623958 2535 ntBASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
MRPL55Q7Z7F7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
MRPL55Q7Z7F7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.51
MRPL55Q7Z7F7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
MRPL55Q7Z7F7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC11.9□□□□□ -0.51
MRPL55Q7Z7F7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
MRPL55Q7Z7F7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 FAM201B-201ENST00000458407 597 ntBASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 AC091390.4-202ENST00000476426 537 ntBASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 RPPH1-201ENST00000516869 333 ntBASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 RARRES2P10-201ENST00000564312 460 ntBASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 AC073195.1-201ENST00000607241 877 ntBASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 KRT8P32-201ENST00000512863 1461 ntBASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC11.89□□□□□ -0.51
MRPL55Q7Z7F7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AL135905.2-201ENST00000584934 1404 ntBASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AL365209.1-201ENST00000624418 6473 ntBASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 FAM207BP-201ENST00000447172 505 ntBASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC11.88□□□□□ -0.51
MRPL55Q7Z7F7 AC126763.1-201ENST00000552015 2118 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms