Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 AC010240.3-201ENST00000607688 395 ntBASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 AL590326.2-201ENST00000625139 305 ntBASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 AL031432.5-201ENST00000641059 760 ntBASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LYSMD3Q7Z3D4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 DUX4L26-201ENST00000489078 1255 ntBASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
LYSMD3Q7Z3D4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.52■□□□□ 0.55
LYSMD3Q7Z3D4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.52■□□□□ 0.55
LYSMD3Q7Z3D4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LYSMD3Q7Z3D4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
LYSMD3Q7Z3D4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LYSMD3Q7Z3D4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.52■□□□□ 0.55
LYSMD3Q7Z3D4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
LYSMD3Q7Z3D4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LYSMD3Q7Z3D4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 LTB4R2-202ENST00000528054 3092 ntBASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 RNF152P1-201ENST00000397754 604 ntBASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LYSMD3Q7Z3D4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 TSPY5P-201ENST00000426936 936 ntBASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LYSMD3Q7Z3D4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms