Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL4Q6ZR62 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.31■□□□□ 0.36
RTL4Q6ZR62 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 RNF152P1-201ENST00000397754 604 ntBASIC17.3■□□□□ 0.36
RTL4Q6ZR62 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 YBX1P2-201ENST00000489612 999 ntBASIC17.3■□□□□ 0.36
RTL4Q6ZR62 AC140113.3-201ENST00000605663 199 ntBASIC17.3■□□□□ 0.36
RTL4Q6ZR62 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 AL031598.1-201ENST00000561511 1773 ntBASIC17.3■□□□□ 0.36
RTL4Q6ZR62 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTL4Q6ZR62 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 GPAT2P1-201ENST00000444924 1672 ntBASIC17.29■□□□□ 0.36
RTL4Q6ZR62 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 PKD1P1-201ENST00000458669 6805 ntBASIC17.29■□□□□ 0.36
RTL4Q6ZR62 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 AL023284.2-201ENST00000405850 579 ntBASIC17.29■□□□□ 0.36
RTL4Q6ZR62 MCCD1P1-208ENST00000445732 328 ntBASIC17.29■□□□□ 0.36
RTL4Q6ZR62 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 NEK4P2-201ENST00000580004 1012 ntBASIC17.29■□□□□ 0.36
RTL4Q6ZR62 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTL4Q6ZR62 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 AC009947.2-201ENST00000444014 672 ntBASIC17.28■□□□□ 0.36
RTL4Q6ZR62 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 WWOX-216ENST00000569818 525 ntBASIC17.28■□□□□ 0.36
RTL4Q6ZR62 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 AL445228.2-201ENST00000605589 952 ntBASIC17.28■□□□□ 0.36
RTL4Q6ZR62 CR769767.2-201ENST00000622735 460 ntBASIC17.28■□□□□ 0.36
RTL4Q6ZR62 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RTL4Q6ZR62 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms