Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 KRT8P50-201ENST00000562022 1438 ntBASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 NAPSB-206ENST00000562112 1266 ntBASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NHLRC1Q6VVB1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 AC034236.2-201ENST00000606662 1610 ntBASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 HOXB1-202ENST00000577092 1414 ntBASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NHLRC1Q6VVB1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 MYLKP1-201ENST00000509077 1580 ntBASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 AC087499.1-201ENST00000418141 1075 ntBASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 ECEL1P2-202ENST00000465689 757 ntBASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 AC012306.2-201ENST00000609350 630 ntBASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 MYC-208ENST00000641036 567 ntBASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 BICD1-207ENST00000551848 1962 ntBASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NHLRC1Q6VVB1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NHLRC1Q6VVB1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms