Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 AC005034.1-201ENST00000426657 489 ntBASIC23.82■■□□□ 1.4
BRWD3Q6RI45 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC23.82■■□□□ 1.4
BRWD3Q6RI45 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 AC006557.2-201ENST00000592985 1240 ntBASIC23.81■■□□□ 1.4
BRWD3Q6RI45 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRWD3Q6RI45 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 BX005266.1-201ENST00000473402 457 ntBASIC23.8■■□□□ 1.4
BRWD3Q6RI45 MEIS3P1-201ENST00000495167 958 ntBASIC23.8■■□□□ 1.4
BRWD3Q6RI45 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 AC092474.2-201ENST00000424288 719 ntBASIC23.8■■□□□ 1.4
BRWD3Q6RI45 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC23.8■■□□□ 1.4
BRWD3Q6RI45 HCG4B-203ENST00000450128 991 ntBASIC23.8■■□□□ 1.4
BRWD3Q6RI45 KRT18P41-201ENST00000518924 1277 ntBASIC23.8■■□□□ 1.4
BRWD3Q6RI45 AC068587.9-201ENST00000641814 219 ntBASIC23.8■■□□□ 1.4
BRWD3Q6RI45 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 BAD-202ENST00000394531 631 ntTSL 3 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 CBR1-202ENST00000399191 838 ntTSL 3 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 AC069262.1-201ENST00000539058 672 ntBASIC23.79■■□□□ 1.4
BRWD3Q6RI45 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRWD3Q6RI45 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 METTL26-204ENST00000397665 558 ntTSL 2 BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 MTCL1P1-201ENST00000446207 792 ntBASIC23.78■■□□□ 1.4
BRWD3Q6RI45 SIGLEC30P-201ENST00000455569 941 ntBASIC23.78■■□□□ 1.4
BRWD3Q6RI45 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 PDPK2P-202ENST00000562415 1191 ntBASIC23.78■■□□□ 1.4
BRWD3Q6RI45 AF228730.6-201ENST00000641497 218 ntBASIC23.78■■□□□ 1.4
BRWD3Q6RI45 AC084121.3-201ENST00000641716 218 ntBASIC23.78■■□□□ 1.4
BRWD3Q6RI45 AC105233.6-201ENST00000642093 218 ntBASIC23.78■■□□□ 1.4
BRWD3Q6RI45 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRWD3Q6RI45 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.77■■□□□ 1.4
BRWD3Q6RI45 ELK2BP-201ENST00000415014 1224 ntBASIC23.77■■□□□ 1.4
BRWD3Q6RI45 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC23.77■■□□□ 1.4
BRWD3Q6RI45 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BRWD3Q6RI45 AC109322.1-201ENST00000524499 1264 ntBASIC23.77■■□□□ 1.4
BRWD3Q6RI45 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC23.77■■□□□ 1.4
BRWD3Q6RI45 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC23.77■■□□□ 1.4
BRWD3Q6RI45 DUX4L17-201ENST00000557360 1267 ntBASIC23.77■■□□□ 1.4
BRWD3Q6RI45 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.77■■□□□ 1.4
BRWD3Q6RI45 INO80C-206ENST00000586489 594 ntTSL 3 BASIC23.77■■□□□ 1.4
BRWD3Q6RI45 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRWD3Q6RI45 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms