Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM88Q6PEY1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 AC090192.1-201ENST00000517740 490 ntBASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TMEM88Q6PEY1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 KRT18P11-201ENST00000435214 1283 ntBASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 AP001160.3-201ENST00000601484 763 ntBASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 BID-214ENST00000617586 542 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM88Q6PEY1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 AC080038.1-201ENST00000611274 1154 ntBASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms