Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 COX20P2-201ENST00000452636 358 ntBASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 AC113404.2-201ENST00000507884 177 ntBASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 AP002472.1-201ENST00000577490 586 ntBASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 NKAPP1-205ENST00000585790 367 ntBASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 AL357033.4-201ENST00000617703 1807 ntBASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 TEX21P-204ENST00000641479 1693 ntBASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTCRAQ6ISU1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 HLA-J-203ENST00000494367 1087 ntBASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTCRAQ6ISU1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 CNN2P11-201ENST00000429351 262 ntBASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.93■□□□□ 0.62
PTCRAQ6ISU1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 KRT8P50-201ENST00000562022 1438 ntBASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 LAGE3P1-201ENST00000425356 484 ntBASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 AC008687.5-201ENST00000593746 558 ntBASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTCRAQ6ISU1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms