Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39BQ5VTQ0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.23■□□□□ 0.67
TTC39BQ5VTQ0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
TTC39BQ5VTQ0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TTC39BQ5VTQ0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 AL441883.1-201ENST00000566170 1045 ntBASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 AC112497.1-201ENST00000624824 639 ntBASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 AC034236.2-201ENST00000606662 1610 ntBASIC19.22■□□□□ 0.67
TTC39BQ5VTQ0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 LETM1P2-201ENST00000597330 2178 ntBASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TTC39BQ5VTQ0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 AC034232.1-201ENST00000506026 1064 ntBASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.2■□□□□ 0.66
TTC39BQ5VTQ0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms