Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.04■□□□□ 0.16
ATPAF1Q5TC12 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 KRT17P2-201ENST00000300992 1314 ntBASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 TSPY21P-201ENST00000433481 731 ntBASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 AL355355.2-201ENST00000442321 338 ntBASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 AC026471.5-201ENST00000615068 467 ntBASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 MIR6786-201ENST00000616843 113 ntBASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 RCC2P6-201ENST00000526625 1557 ntBASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 OR6D1P-202ENST00000641007 5290 ntBASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.03■□□□□ 0.16
ATPAF1Q5TC12 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 AC012313.1-201ENST00000593393 3059 ntBASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 B3GAT3P1-201ENST00000471720 806 ntBASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 MIR4497-201ENST00000583208 89 ntBASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 MIR4785-201ENST00000585005 73 ntBASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATPAF1Q5TC12 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF1Q5TC12 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 AC073592.3-201ENST00000625118 1834 ntBASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 ESPNP-201ENST00000270691 2015 ntBASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 MESTP1-201ENST00000404287 994 ntBASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 AC011506.1-201ENST00000474329 610 ntBASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 AC091390.4-202ENST00000476426 537 ntBASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATPAF1Q5TC12 AC093827.2-201ENST00000512654 315 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms