Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 NCF1B-203ENST00000435988 1254 ntBASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 PKD1P1-201ENST00000458669 6805 ntBASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00242Q5T6M2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 RCC2P3-201ENST00000418112 1537 ntBASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00242Q5T6M2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 AC009053.2-201ENST00000563701 2365 ntBASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms