Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.24■□□□□ 0.67
ATP13A4Q4VNC1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.24■□□□□ 0.67
ATP13A4Q4VNC1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ATP13A4Q4VNC1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.24■□□□□ 0.67
ATP13A4Q4VNC1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP13A4Q4VNC1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP13A4Q4VNC1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 AC010947.1-201ENST00000623454 693 ntBASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ATP13A4Q4VNC1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 REXO1L9P-201ENST00000604264 2108 ntBASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 SDHAP2-201ENST00000455183 2001 ntBASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 AP000593.1-201ENST00000393668 712 ntBASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 CCR12P-201ENST00000446203 998 ntBASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 AC116562.4-202ENST00000641738 218 ntBASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP13A4Q4VNC1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 AL163051.1-201ENST00000569214 1512 ntBASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 TSPY14P-201ENST00000303979 915 ntBASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 BX088651.1-201ENST00000540551 451 ntBASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 C2orf69P3-201ENST00000565542 1120 ntBASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP13A4Q4VNC1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
ATP13A4Q4VNC1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms