Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 KRT18P31-201ENST00000506277 1292 ntBASIC21.55■■□□□ 1.04
CERKLQ49MI3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 SDHAP2-201ENST00000455183 2001 ntBASIC21.55■■□□□ 1.04
CERKLQ49MI3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CERKLQ49MI3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CERKLQ49MI3 AL499627.1-201ENST00000569373 2188 ntBASIC21.54■■□□□ 1.04
CERKLQ49MI3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CERKLQ49MI3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CERKLQ49MI3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CERKLQ49MI3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.54■■□□□ 1.04
CERKLQ49MI3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CERKLQ49MI3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CERKLQ49MI3 IGHV3-47-201ENST00000425060 335 ntBASIC21.54■■□□□ 1.04
CERKLQ49MI3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
CERKLQ49MI3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CERKLQ49MI3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.54■■□□□ 1.04
CERKLQ49MI3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.54■■□□□ 1.04
CERKLQ49MI3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.54■■□□□ 1.04
CERKLQ49MI3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CERKLQ49MI3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CERKLQ49MI3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CERKLQ49MI3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CERKLQ49MI3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CERKLQ49MI3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CERKLQ49MI3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CERKLQ49MI3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CERKLQ49MI3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CERKLQ49MI3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.53■■□□□ 1.04
CERKLQ49MI3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CERKLQ49MI3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CERKLQ49MI3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CERKLQ49MI3 AC246785.2-201ENST00000432512 513 ntBASIC21.53■■□□□ 1.04
CERKLQ49MI3 FAAHP1-202ENST00000446499 1238 ntBASIC21.53■■□□□ 1.04
CERKLQ49MI3 EMBP1-201ENST00000458200 901 ntBASIC21.53■■□□□ 1.04
CERKLQ49MI3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.53■■□□□ 1.04
CERKLQ49MI3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
CERKLQ49MI3 AC099336.1-202ENST00000602961 463 ntBASIC21.53■■□□□ 1.04
CERKLQ49MI3 AC138894.3-201ENST00000603787 634 ntBASIC21.53■■□□□ 1.04
CERKLQ49MI3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CERKLQ49MI3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
CERKLQ49MI3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.53■■□□□ 1.04
CERKLQ49MI3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CERKLQ49MI3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.52■■□□□ 1.04
CERKLQ49MI3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.52■■□□□ 1.04
CERKLQ49MI3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.52■■□□□ 1.04
CERKLQ49MI3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 VENTXP7-201ENST00000475503 772 ntBASIC21.52■■□□□ 1.04
CERKLQ49MI3 AP005901.3-202ENST00000581653 237 ntBASIC21.52■■□□□ 1.04
CERKLQ49MI3 AC008687.5-201ENST00000593746 558 ntBASIC21.52■■□□□ 1.04
CERKLQ49MI3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.52■■□□□ 1.04
CERKLQ49MI3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CERKLQ49MI3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CERKLQ49MI3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.52■■□□□ 1.04
CERKLQ49MI3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.52■■□□□ 1.03
CERKLQ49MI3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CERKLQ49MI3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CERKLQ49MI3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.51■■□□□ 1.03
CERKLQ49MI3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CERKLQ49MI3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.51■■□□□ 1.03
CERKLQ49MI3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CERKLQ49MI3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CERKLQ49MI3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.51■■□□□ 1.03
CERKLQ49MI3 AC091607.1-201ENST00000490318 1060 ntBASIC21.51■■□□□ 1.03
CERKLQ49MI3 AC113404.2-201ENST00000507884 177 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms